any chance theres old fuel in the main tank. Try getting some of that fuel into a clear container and let it sit a few hours, see if it separates from any water.
Also do you have a regular marine screw on filter? If so was the portable tank running thru it? If not, change that filter, and also check for any obstructions that might have got caught in those fittings.
Finally, if the portable tank wasn't running thru the filter, try going through that exercise again running the portable tank to the filter housing then to the engine.